
吸虱亚目trnL1(tag)和trnL2(taa)基因间 独立进化和协同进化的研究
Independent and concerted evolution of the trnL1(tag) and trnL2(taa) genes in Anoplura
张艳芳 董文鸽 陈 婷
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DOI:10.7679/j.issn.2095-1353.2021.090
作者单位:大理大学病原与媒介生物研究所,大理 671000;大理大学病原与媒介生物研究所,大理 671000;大理大学病原与媒介生物研究所,大理 671000
中文关键词:吸虱;trnL1(tag);trnL2(tag);裂化线粒体基因组;协同进化;独立进化
英文关键词:Anoplura; trnL1(tag); trnL2(taa); fragmented mitochondrial genome; concerted evolution; independent evolution
中文摘要:
【目的】 吸虱亚目是真兽类动物的永久专性体表寄生虫。吸虱亚目的线粒体基因组发生了剧烈的裂化,形成了不同于以往典型单一大环的多个裂化微环。本文对17种吸虱以及外群尖叫虱Bothriometopus
macrocnemis的trnL1(tag)和trnL2(taa)基因序列进行比较分析,探讨trnL1(tag)和trnL2(taa)基因间的独立进化和协同进化。【方法】 对云南采集到的3科3属4种吸虱(弯多板虱Polyplax
reclinata、锯多板虱Polyplax serrata、太平洋甲胁虱Hoplopleura pacifica和麝鼩钩板虱Ancistroplax crocidurae),用Illumina MiSeq PE250平台高通量测序后与GenBank中查找的其它13种吸虱及尖叫虱的trnL1(tag)和trnL2(taa)基因序列进行比较,采用最大简约法(Maximum parsimony,MP)分析17种吸虱trnL1(tag)和trnL2(taa)基因的进化关系。【结果】 17种吸虱的trnL1(tag)和trnL2(taa)基因均形成典型的三叶草结构,trnL1(tag)和trnL2(taa)基因在虱属、阴虱属和猴虱属中有较长的等同序列;在甲胁虱属和钩板虱属中有很短的等同序列;在多板虱属、微胸虱属和血虱属中的等同序列介于二者之间。常见典型单一环状线粒体基因组物种的trnL1(tag)和trnL2(taa)基因等同序列的长度在6-10 bp之间。对17种吸虱的trnL1(tag)和trnL2(taa)基因序列进行同源性比较分析,发现不同属吸虱的trnL1(tag)和trnL2(taa)基因序列相似度差异较大,同属内吸虱的trnL1(tag)和trnL2(taa)基因序列相似度差异较小。基于17种吸虱及尖叫虱的trnL1(tag)和trnL2(taa)基因构建系统进化树,结果表明trnL1(tag)、trnL2(taa)及trnL1(tag)和trnL2(taa)基因间既有协同进化又有独立进化。【结论】 trnL1(tag)和trnL2(taa)基因等同序列较长的吸虱易发生协同进化,等同序列较短的吸虱易发生独立进化。吸虱亚目的trnL1(tag)和trnL2(taa)基因协同进化是长期的或发生在远缘物种间,而独立进化是短期(两次重组事件间)的或发生在近缘物种间。吸虱亚目线粒体基因组的裂化模式可能影响trnL1(tag)和trnL2(taa)基因等同序列的长短。
英文摘要:
Anoplura (lice) are
obligate ectoparasites of eutherians. The mitochondrial genome of Anoplura has undergone
drastic fragmentation and formed multiple mitochondrial minicircular
chromosomes that differ from the typical single mitochondrial genome. Sequences
of trnL1(tag) and trnL2(taa)
genes from 17 species of sucking lice and an outgroup (the screamer louse, Bothriometopus
macrocnemis) were compared to investigate the independent, and concerted,
evolution of these genes. [Methods] The trnL1(tag) and trnL2(taa) genes of 4 species of sucking lice from 3 genera
and 3 families collected in Yunnan (Polyplax reclinata, Polyplax serrata, Hoplopleura
pacifica, Ancistroplax crocidurae) were sequenced by high-throughput sequencing on the Illumina MiSeq PE250
platform, and compared with those of 13 other species and the screamer louse
outgroup obtained from GenBank. Evolutionary relationships among species were
inferred using the maximum parsimony method (MP) and the homology of trnL1(tag) and trnL2(taa) gene sequences was
analyzed. [Results] The trnL1(tag) and trnL2(taa) genes of all
17 species of sucking lice formed a typical clover structure. TrnL1(tag) and trnL2(taa) genes have very long
identical sequences in Pediculus, Pthirus and Pedicinus, very short identical sequences in Hoplopleura and Ancistroplax, and intermediate length sequences in Polyplax, Microthoracius and Haematopinus. The length of identical trnL1(tag) and trnL2(taa) gene sequences in
common, typical, single circular, mitochondrial genome species is 6-10 bp.
Sequences in different genera sucking lice were significantly different,
whereas those in the same genus were only slightly different. A phylogenetic
tree indicates that there has been both concerted, and independent, evolution
of the trnL1(tag), trnL2(taa), trnL1(tag)
and trnL2(taa) genes. [Conclusion] Sucking lice with longer identical trnL1(tag) and trnL2(taa) gene sequences are more
likely to have undergone concerted evolution, whereas those with shorter
identical sequences are more likely to have undergone independent evolution.
Concerted evolution would be expected over the long term, or between distantly
related species, whereas independent evolution would be expected over the short
term (between two recombination events), or between closely related species.
The fragmented pattern of the Anoplura mitochondrial genome may influence the length
of identical trnL1(tag)
and trnL2(taa) gene sequences.