Characterization and phylogenetic analysis of the mitochondrial genome of the Asilidae
Abstract:
[Aim] The family Asilidae belongs to
Brachycera, a suborder of the Diptera. All insects in this family are
carnivorous, the adults preying on insects such as wasps, locusts, leafhoppers
and flower flies. This study aims to better understand the mitochondrial genome
characteristics and phylogenetic relationships of the Asilidae. [Methods] This paper presents the results of the first
omics analysis and phylogenetic discussion based on the mitochondrial genome
sequences of 16 species of this group. [Results] The mitochondrial genome of the Asilidae
includes 22 tRNAs, 13 protein coding genes, 2 rRNAs, and 1 control region. The
gene sequence is consistent with that of Drosophila melanogaster, and no
gene rearrangement has been found. Analysis of the nucleotide composition shows
that AT content is much higher than GC content, indicating a clear AT bias. The
starting codons of nine genes, including atp6, atp8, cox2, cox3, cytb, nad2, nad3, nad4l, and nad6 are all ATN, whereas cox1, nad1, nad4, and nad5 not
only have ATN but also TCG and GTG. The end codons are very similar, mostly
TAA, TAG, but also the incomplete termination codons T and TA. Relative
synonymous codon usage shows that the UUA codon of Leu2 was
the most frequent, whereas the GCG codon of Ala and the ACG codon of Thr were
the least common. The evolutionary rate of the 13 protein coding genes can be
ranked as follows: atp8 > nad6 > nad4 > nad5 > nad2 > nad4l > nad1 > nad3 > atp6 > cox2 > cox3 > cytb > cox1. [Conclusion] A phylogenetic analysis based on the PCGs
dataset has confirmed the monophyly of the family Asilidae, the subfamily
Asilinae, and the subfamily Leptogastrinae. This study provides a scientific
basis for in-depth understanding of the biological characteristics, origin, and
evolution, of insectivorous insects.